The detailed information of tRNA gene sequence


Sequence ID>WENV170689598
Genome IDLFRM01303029
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 177
End posion on genome 102
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ctaaataagt
tRNA gene sequence 
GGCCTTGTAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTTGTGTCGGTGGTTCGATT
CCGCCCAAGGCCACCA
Downstream region at tRNA end position 
aagaattcaa
Secondary structure (Cloverleaf model)
>WENV170689598	Phe	GAA
                   t      ACCA aagaattcaa
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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