The detailed information of tRNA gene sequence


Sequence ID>WENV170689604
Genome IDLFRM01303293
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 866
End posion on genome 790
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cacaccaaag
tRNA gene sequence 
AGTCCTATAGCTCAGTTGGTTAGAGCGCTACACTGATAATGTAGAGGTCGGCAGTTCAAC
TCTGCCTGGGACTACCA
Downstream region at tRNA end position 
agaatcgaaa
Secondary structure (Cloverleaf model)
>WENV170689604	Ile	GAT
                   g      ACCA agaatcgaaa
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T C
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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