The detailed information of tRNA gene sequence


Sequence ID>WENV170689608
Genome IDLFRM01303379
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2325
End posion on genome 2241
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aactatatat
tRNA gene sequence 
GGAGGGATACCCAAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGTCACTGACTTCGAT
GGTTCGAATCCATCTCCCTCCACCA
Downstream region at tRNA end position 
gaacccgcag
Secondary structure (Cloverleaf model)
>WENV170689608	Tyr	GTA
                   t      ACCA gaacccgcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T A C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGTCACTGACTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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