The detailed information of tRNA gene sequence


Sequence ID>WENV170689644
Genome IDLFRM01305096
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 50837
End posion on genome 50764
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tttacagttt
tRNA gene sequence 
GCCTCGTTGGCTCAGCCCGGTAGAGCGAGTGACTTGTAATCACTAGGTCGCGTGTTCGAA
TCACGCACGAGGCTtct
Downstream region at tRNA end position 
tattaatttt
Secondary structure (Cloverleaf model)
>WENV170689644	Thr	TGT
                   t      Ttct tattaatttt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C G C A C     A
      C G A        G      | | | | |     G
    C       C T C G       G C G T G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    A - T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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