The detailed information of tRNA gene sequence


Sequence ID>WENV170689714
Genome IDLFRM01308086
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 184
End posion on genome 113
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcaacgccac
tRNA gene sequence 
GGTGGAATGGCCGAGTGGTGAGGCAACGGCCTGCAAAGCCGTGCACACGGGTTCGATTCC
CGTTTCCACCTCgc
Downstream region at tRNA end position 
atcaaattgc
Secondary structure (Cloverleaf model)
>WENV170689714	Cys	GCA
                   c      TCgc atcaaattgc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     A - T          T T
                    T     T G C C C     A
        G A        G      | | | | |     G
      T     G C C G       A C G G G     C
      G       | | |                 T T
      G     A G G C
        T G        A     GCAC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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