The detailed information of tRNA gene sequence


Sequence ID>WENV170689774
Genome IDLFRM01310959
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 8644
End posion on genome 8719
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cattatatcc
tRNA gene sequence 
GCCTTGGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCGGTGGTTCGATT
CCGCCCCAAGGCACCA
Downstream region at tRNA end position 
ttagatatgc
Secondary structure (Cloverleaf model)
>WENV170689774	Phe	GAA
                   c      ACCA ttagatatgc
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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