The detailed information of tRNA gene sequence


Sequence ID>WENV170689779
Genome IDLFRM01310972
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1155
End posion on genome 1071
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aagtctacat
tRNA gene sequence 
GCCCGGATGGCGGAATTGGTAGACGCGCTGGTCTCAAACACCAGTGGATTCACTTCCATG
CCGGTTCGATCCCGGCTCTGGGTACtt
Downstream region at tRNA end position 
taaatcctct
Secondary structure (Cloverleaf model)
>WENV170689779	Leu	CAA
                   t      ACtt taaatcctct
                     G + T
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C
                     A - T          C T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGATTCACTTCCAT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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