The detailed information of tRNA gene sequence


Sequence ID>WENV170689807
Genome IDLFRM01312238
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 622
End posion on genome 547
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tccacgttgt
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGTCAGTTCGATC
CTGATCAGCTCCACCA
Downstream region at tRNA end position 
cttaaaacta
Secondary structure (Cloverleaf model)
>WENV170689807	Ala	GGC
                   t      ACCA cttaaaacta
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T A G T C     A
      C G A        A      + | | | |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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