The detailed information of tRNA gene sequence


Sequence ID>WENV170689871
Genome IDLFRM01315166
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 102
End posion on genome 176
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaaatattat
tRNA gene sequence 
GGCACCATAGCCAAGTGGTAAGGCAGGGGTCTGCAAAACCCCTATTCTCCAGTTCAAATC
TGGATGGTGCCTCCA
Downstream region at tRNA end position 
gagcctcctc
Secondary structure (Cloverleaf model)
>WENV170689871	Cys	GCA
                   t      TCCA gagcctcctc
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T          T A
                    T     A G G T C     A
        G A        A      | | | | |     A
      T     A C C G       T C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G - C
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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