The detailed information of tRNA gene sequence


Sequence ID>WENV170689877
Genome IDLFRM01315710
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1170
End posion on genome 1243
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgtttcagac
tRNA gene sequence 
GGGCCTGTAGCTCAGTCGGTTAGAGCACTTCTCTGATAAGGAAGGGGTCATTAGTTCAAC
TCTAATCAGGCCCAgct
Downstream region at tRNA end position 
cggcgggcgc
Secondary structure (Cloverleaf model)
>WENV170689877	Ile	GAT
                   c      Agct cggcgggcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T C
                    T     T A A T C     A
      T G A        A      | | | | |     A
    C       C T C G       A T T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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