The detailed information of tRNA gene sequence


Sequence ID>WENV170689920
Genome IDLFRM01317833
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 416
End posion on genome 341
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtctcaatat
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGGAGTTCGAGT
CTCCTCATCTCCACCA
Downstream region at tRNA end position 
tatttattaa
Secondary structure (Cloverleaf model)
>WENV170689920	Ala	TGC
                   t      ACCA tatttattaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T G
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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