The detailed information of tRNA gene sequence


Sequence ID>WENV170689969
Genome IDLFRM01319239
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 926
End posion on genome 850
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccattgattt
tRNA gene sequence 
CGGGAAGTAGCTTAGCTTGGCAGAGCGCCTGGTTTGGGACCAGGAGGTCGCAGGTTCAAA
TCCTGTCTTCCCGACCA
Downstream region at tRNA end position 
tcattaattt
Secondary structure (Cloverleaf model)
>WENV170689969	Pro	TGG
                   t      ACCA tcattaattt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       T T C G       G C A G G     C
    T       + | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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