The detailed information of tRNA gene sequence


Sequence ID>WENV170689982
Genome IDLFRM01320210
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 29173
End posion on genome 29098
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tttttgacgt
tRNA gene sequence 
TCCTCAATAGCTCAGTCGGTAGAGCATGCGGCTGTTAACCGCAGGGTCGTTGGTTCGAGT
CCAACTTGAGGAGCCA
Downstream region at tRNA end position 
gattaaagta
Secondary structure (Cloverleaf model)
>WENV170689982	Asn	GTT
                   t      GCCA gattaaagta
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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