The detailed information of tRNA gene sequence


Sequence ID>WENV170689996
Genome IDLFRM01320837
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 144
End posion on genome 231
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
taacaccctT
tRNA gene sequence 
GCCGGGGTGGCGGAACTGGCAGACGCACAGGACTTAAAATCCTGCGGTGAGTGATCACCG
TGCCGGTTCGATTCCGGCCCTCGGCATtc
Downstream region at tRNA end position 
cttcttaagg
Secondary structure (Cloverleaf model)
>WENV170689996	Leu	TAA
                   T      ATtc cttcttaagg
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T T
                    T     C G G C C     A
      C A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGTGAGTGATCACCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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