The detailed information of tRNA gene sequence


Sequence ID>WENV170690048
Genome IDLFRM01323908
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 37703
End posion on genome 37779
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accattatac
tRNA gene sequence 
GGCCCAGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGAGGGTTCGAG
TCCCTTCTGGGTCGCCA
Downstream region at tRNA end position 
tcagggcccc
Secondary structure (Cloverleaf model)
>WENV170690048	Asp	GTC
                   c      GCCA tcagggcccc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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