The detailed information of tRNA gene sequence


Sequence ID>WENV170690082
Genome IDLFRM01325085
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 39275
End posion on genome 39200
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gatgcgtcgg
tRNA gene sequence 
GGGAGCATAGCTCAGCTGGGAGAGCATCTGCCTTACACGCAGAGGGTCACAGGTTCGAGC
CCTGTTGTTCCCACCA
Downstream region at tRNA end position 
aaatggcccg
Secondary structure (Cloverleaf model)
>WENV170690082	Val	TAC
                   g      ACCA aaatggcccg
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     A - T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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