The detailed information of tRNA gene sequence


Sequence ID>WENV170690085
Genome IDLFRM01325085
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 38956
End posion on genome 38882
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gctccatccc
tRNA gene sequence 
GGCGCCATAGCCAAGTGGTAAGGCGAAGGTCTGCAAAACCTTTATTCCCCAGTTCGAATC
TGGGTGGCGCCTCCA
Downstream region at tRNA end position 
caacgattgc
Secondary structure (Cloverleaf model)
>WENV170690085	Cys	GCA
                   c      TCCA caacgattgc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TATTC
                    A - T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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