The detailed information of tRNA gene sequence


Sequence ID>WENV170690126
Genome IDLFRM01326739
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 925
End posion on genome 849
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
acttaatttc
tRNA gene sequence 
GGGCGATTAGCTCAGCTGGTTAGAGTACCACGTTGACATCGTGGGGGTCGATGGTTCGAG
TCCATTATCGCCCACCA
Downstream region at tRNA end position 
atgttttgtc
Secondary structure (Cloverleaf model)
>WENV170690126	Val	GAC
                   c      ACCA atgttttgtc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T T A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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