The detailed information of tRNA gene sequence


Sequence ID>WENV170690132
Genome IDLFRM01326857
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 29424
End posion on genome 29497
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
caccaaaaat
tRNA gene sequence 
GCGGGTGTAGTTCAATGGTAGAATTCCAGCCTTCCAAGCTGGTTGTGAGGGTTCGATCCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
ttatataaaa
Secondary structure (Cloverleaf model)
>WENV170690132	Gly	TCC
                   t      TCCA ttatataaaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T T G       G A G G G     C
      G     | | | +                 T T
      G     G A A T
        T A        T     TTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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