The detailed information of tRNA gene sequence


Sequence ID>WENV170690133
Genome IDLFRM01326857
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 29518
End posion on genome 29593
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agaaatattt
tRNA gene sequence 
CGGGGTGTGGCGCAGATGGTAGCGCGCGTGCTTTGGGAGCATGAGGTCGCAGGTTCAAGT
CCTGTCACCCCGACCA
Downstream region at tRNA end position 
ttaaaaaata
Secondary structure (Cloverleaf model)
>WENV170690133	Pro	TGG
                   t      ACCA ttaaaaaata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
      A G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    G + T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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