The detailed information of tRNA gene sequence


Sequence ID>WENV170690135
Genome IDLFRM01326857
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 29712
End posion on genome 29788
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aatatactat
tRNA gene sequence 
GCGTCTTTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTAGGCCAGGAGTTCGAA
TCTCTTAAGACGCACCA
Downstream region at tRNA end position 
atatatggtg
Secondary structure (Cloverleaf model)
>WENV170690135	Arg	TCT
                   t      ACCA atatatggtg
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A
                     T - A          T A
                    T     T T C T C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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