The detailed information of tRNA gene sequence


Sequence ID>WENV170690138
Genome IDLFRM01326857
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 29985
End posion on genome 30069
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tatataatat
tRNA gene sequence 
GCAGATGTGGCGGAATTGGCAGACGCGCTAGACTTAGGATCTAGTGCCTTACGGCTTGGG
GGTTCGACTCCCTTCATCTGCACCA
Downstream region at tRNA end position 
aattttaatt
Secondary structure (Cloverleaf model)
>WENV170690138	Leu	TAG
                   t      ACCA aattttaatt
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     T T C C C     A
      T A A        G      + + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGCCTTACGGCTT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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