The detailed information of tRNA gene sequence


Sequence ID>WENV170690179
Genome IDLFRM01328495
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 155
End posion on genome 80
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgtgcaccat
tRNA gene sequence 
TCCTGCGTAGCTCAGTTGGCAGAGCATCCGACTGTTAATCGGACTGTCACTGGTTCAAGC
CCAGTCGCAGGAGCCA
Downstream region at tRNA end position 
ccaagccgcc
Secondary structure (Cloverleaf model)
>WENV170690179	Asn	GTT
                   t      GCCA ccaagccgcc
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C
                     C - G
                     G - C          C G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CTGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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