The detailed information of tRNA gene sequence


Sequence ID>WENV170690189
Genome IDLFRM01328915
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 19010
End posion on genome 19085
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
agaaggtttt
tRNA gene sequence 
GTCCCCTTCGTCTAGTGGTCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCAAGT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
tattgtaaaa
Secondary structure (Cloverleaf model)
>WENV170690189	Glu	TTC
                   t      GCCA tattgtaaaa
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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