The detailed information of tRNA gene sequence


Sequence ID>WENV170690213
Genome IDLFRM01329996
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 93
End posion on genome 17
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gaatataaac
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA
TCCGTTATTCTCCACTA
Downstream region at tRNA end position 
taaacaaaga
Secondary structure (Cloverleaf model)
>WENV170690213	Ala	TGC
                   c      ACTA taaacaaaga
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T A
                    T     T T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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