The detailed information of tRNA gene sequence


Sequence ID>WENV170690250
Genome IDLFRM01332603
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 513
End posion on genome 596
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
aaagtaaaat
tRNA gene sequence 
GCGGATGTGGCGGAATTGGCAGACGCACCAGACTTAGGATCTGGCGCCTACGGCGTGGGG
GTTCGACTCCCTTCATCCGCACCA
Downstream region at tRNA end position 
ctttacttat
Secondary structure (Cloverleaf model)
>WENV170690250	Leu	TAG
                   t      ACCA ctttacttat
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     T T C C C     A
      T A A        G      + + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGCCTACGGCGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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