The detailed information of tRNA gene sequence


Sequence ID>WENV170690253
Genome IDLFRM01332603
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 784
End posion on genome 859
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
cactttatat
tRNA gene sequence 
AGGGGATTCGCCAAGTCGGTAAGGCATAGCACTTTGACTGCTACATGCGTAGGTTCGAGT
CCTGCATCCCCTGCCA
Downstream region at tRNA end position 
aatgaatatt
Secondary structure (Cloverleaf model)
>WENV170690253	Gln	TTG
                   t      GCCA aatgaatatt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     C G T C C     A
      T G A        C      | + | | |     G
    C       A C C G       G T A G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     CATGC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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