The detailed information of tRNA gene sequence


Sequence ID>WENV170690267
Genome IDLFRM01332987
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 53326
End posion on genome 53253
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
atgcagattt
tRNA gene sequence 
GCGGGTGTAGTTCAGTGGTAGAACCCCAGCCTTCCAAGCTGGTCGCGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
gtaaaacctc
Secondary structure (Cloverleaf model)
>WENV170690267	Gly	TCC
                   t      TCCA gtaaaacctc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        G A        A      + | | | |     G
      T     C T T G       G A G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        C     TCGC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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