The detailed information of tRNA gene sequence


Sequence ID>WENV170690270
Genome IDLFRM01332987
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 44211
End posion on genome 44136
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
agccaaatat
tRNA gene sequence 
GACCCACTAGCTCAGGCGGTAGAGCACTTGACTTTTAATCAAGGTGTCCGGAGTTCGAGT
CTCCGGTGGGTCACCA
Downstream region at tRNA end position 
aaggaaagcc
Secondary structure (Cloverleaf model)
>WENV170690270	Lys	TTT
                   t      ACCA aaggaaagcc
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G          T G
                    T     G C C T C     A
      G G A        A      | | | | |     G
    C       C T C G       C G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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