The detailed information of tRNA gene sequence


Sequence ID>WENV170690280
Genome IDLFRM01333450
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 421
End posion on genome 507
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cattataaat
tRNA gene sequence 
GGGGATGTGGCGGAATCGGTAGACGCAACGGACTTAAAATCCGTTGAAGGTAACTTCGTG
AGGGTTCAAGTCCCTCCATCCCCACCA
Downstream region at tRNA end position 
ttactattgt
Secondary structure (Cloverleaf model)
>WENV170690280	Leu	TAA
                   t      ACCA ttactattgt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    C       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     TGAAGGTAACTTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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