The detailed information of tRNA gene sequence


Sequence ID>WENV170690282
Genome IDLFRM01333450
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 624
End posion on genome 700
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttattatttt
tRNA gene sequence 
CGGGATGTAGCACAGCTTGGTAGTGCACCTGGTTTGGGACCAGGGGGTCGCAGGTTCGAA
TCCTGTCATCCCGACCA
Downstream region at tRNA end position 
tttatttttt
Secondary structure (Cloverleaf model)
>WENV170690282	Pro	TGG
                   t      ACCA tttatttttt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     G
    T       C A C G       G C A G G     C
    T       | | | |                 T T
    G       G T G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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