The detailed information of tRNA gene sequence


Sequence ID>WENV170690285
Genome IDLFRM01333594
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9263
End posion on genome 9187
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtccaagcgc
tRNA gene sequence 
GGAGCTGTGGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGAC
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
ttatattatt
Secondary structure (Cloverleaf model)
>WENV170690285	Asp	GTC
                   c      GCCA ttatattatt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T G C C C     A
      A G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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