The detailed information of tRNA gene sequence


Sequence ID>WENV170690291
Genome IDLFRM01333756
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 221
End posion on genome 295
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cacgatgaat
tRNA gene sequence 
TCCTCGATAGCTCAACGGTAGAGCAACCGGCTGTTAACCGGTAGGTTGCTGGTTCGAATC
CAGCTCGGGGAGCCA
Downstream region at tRNA end position 
tggcagggta
Secondary structure (Cloverleaf model)
>WENV170690291	Asn	GTT
                   t      GCCA tggcagggta
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     C G A C C     A
        A A        A      | | | | |     G
      C     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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