The detailed information of tRNA gene sequence


Sequence ID>WENV170690292
Genome IDLFRM01333756
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 379
End posion on genome 452
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
accataacat
tRNA gene sequence 
GCGGGTGTAACTCAATGGTAGAGTGCCAGCCTTCCAAGCTGGATACGTGGGTTCGATTCC
CATCACCCGCTCCA
Downstream region at tRNA end position 
aatttgattt
Secondary structure (Cloverleaf model)
>WENV170690292	Gly	TCC
                   t      TCCA aatttgattt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T A C C C     A
        A A        A      + | | | |     G
      T     C T C A       G T G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     ATAC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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