The detailed information of tRNA gene sequence


Sequence ID>WENV170690307
Genome IDLFRM01335005
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 159
End posion on genome 234
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcaagacccc
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCTGCGGTTCGATC
CCGCATAGCTCCACCA
Downstream region at tRNA end position 
tttcttaagg
Secondary structure (Cloverleaf model)
>WENV170690307	Ala	GGC
                   c      ACCA tttcttaagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     A C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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