The detailed information of tRNA gene sequence


Sequence ID>WENV170690321
Genome IDLFRM01335634
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 322
End posion on genome 247
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
catgtggcac
tRNA gene sequence 
GCCACTTTAGCTCAGTCGGTAGAGCGGCTCACTCGTAATGAGCAGGTCGACAGTTCGATT
CTGTCAAGTGGCTCCA
Downstream region at tRNA end position 
tcaggcccta
Secondary structure (Cloverleaf model)
>WENV170690321	Thr	CGT
                   c      TCCA tcaggcccta
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     T - A
                     T - A          T T
                    T     C T G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G A C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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