The detailed information of tRNA gene sequence


Sequence ID>WENV170690331
Genome IDLFRM01335862
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1808
End posion on genome 1880
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
catattgtaa
tRNA gene sequence 
GCGCCTCTAGCTCATTTGGTAGAGCACCTGACTCTTAATCAGGGTGTGCAGGGTTCGAGC
CCCTGGAGGCGCAtcg
Downstream region at tRNA end position 
gtttttgaaa
Secondary structure (Cloverleaf model)
>WENV170690331	Lys	CTT
                   a      Atcg gtttttgaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G          C G
                    T     G T C C C     A
      T T A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTG
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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