The detailed information of tRNA gene sequence


Sequence ID>WENV170690348
Genome IDLFRM01336658
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 8330
End posion on genome 8255
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgaatgcgtt
tRNA gene sequence 
GCTGGTGTAGCTCAGTTGGTAGAGCAGCTGATTTGTAATCAGCAGGTCGGGGGTTCGAGT
CCGTCCACCAGCTCCA
Downstream region at tRNA end position 
tcatgggaga
Secondary structure (Cloverleaf model)
>WENV170690348	Thr	TGT
                   t      TCCA tcatgggaga
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T G C C     A
      T G A        A      | +   | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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