The detailed information of tRNA gene sequence


Sequence ID>WENV170690368
Genome IDLFRM01337701
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 952
End posion on genome 1027
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagggccagt
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCAAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
caaaggccct
Secondary structure (Cloverleaf model)
>WENV170690368	Trp	CCA
                   t      GCCA caaaggccct
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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