The detailed information of tRNA gene sequence


Sequence ID>WENV170690370
Genome IDLFRM01337898
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 115
End posion on genome 39
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcgtaattgg
tRNA gene sequence 
CTGGGTGTGGCGCAGTTTGGTAGCGTGCTTGAATGGGGTTCAAGAGGTCGCAGGTTCAAT
TCCTGTCACCCAGACCA
Downstream region at tRNA end position 
aagaaaaccg
Secondary structure (Cloverleaf model)
>WENV170690370	Pro	GGG
                   g      ACCA aagaaaaccg
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T G T C C     A
      T G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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