The detailed information of tRNA gene sequence


Sequence ID>WENV170690382
Genome IDLFRM01338236
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3290
End posion on genome 3217
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tcagatgcat
tRNA gene sequence 
GGGCCTGTAGCTTAGTCGGCAGAGCGACGGACTCTTAATCCGTAGGCCAAGGGTTCAAAT
CCCTTCAGGCCCGCtg
Downstream region at tRNA end position 
aagacttaat
Secondary structure (Cloverleaf model)
>WENV170690382	Lys	CTT
                   t      GCtg aagacttaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    C       T T C G       A A G G G     C
    G       + | | |                 T T
    G       G A G C
      C A          G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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