The detailed information of tRNA gene sequence


Sequence ID>WENV170690424
Genome IDLFRM01340942
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 284
End posion on genome 366
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cgaaaacgat
tRNA gene sequence 
GGCGGATTTCCCAAGCGGTCAAAGGGAACTGACTGTAAATCAGTCGCTTCGTGCTTCAGT
GGTTCGAATCCATTATCCGCCACgc
Downstream region at tRNA end position 
ctcgatagct
Secondary structure (Cloverleaf model)
>WENV170690424	Tyr	GTA
                   t      ACgc ctcgatagct
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T T A C C     A
      C G A        T      | + | | |     G
    G       A C C C       A G T G G     C
    G         | | |                 T T
    T       A G G G
      C A A        A     CGCTTCGTGCTTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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