The detailed information of tRNA gene sequence


Sequence ID>WENV170690492
Genome IDLFRM01344270
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 367
End posion on genome 279
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcttttact
tRNA gene sequence 
GGAGAAATACCCAAGAGGCTGAAGGGGTCGGTCTCGAAAACCGATAGGAGTGCAAGCTCG
CGAGGGTTCAAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
acgtcaatta
Secondary structure (Cloverleaf model)
>WENV170690492	Ser	CGA
                   t      GCCA acgtcaatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGAGTGCAAGCTCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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