The detailed information of tRNA gene sequence


Sequence ID>WENV170690500
Genome IDLFRM01344842
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 27552
End posion on genome 27477
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgaaagctgt
tRNA gene sequence 
GCTGGTGTAGCTCAGCCGGTAGAGCAGCTGATTTGTAATCAGCAGGTCGGGGGTTCGAGT
CCGTCCACCAGCTCCA
Downstream region at tRNA end position 
attaaaacgg
Secondary structure (Cloverleaf model)
>WENV170690500	Thr	TGT
                   t      TCCA attaaaacgg
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T G C C     A
      C G A        A      | +   | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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