The detailed information of tRNA gene sequence


Sequence ID>WENV170690502
Genome IDLFRM01345079
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 44229
End posion on genome 44304
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgttttatac
tRNA gene sequence 
GCCCTCATAGCTCAGTAGGCAGAGCGCATCCATGGTAAGGATGAGGTCACCAGTTCGATT
CTGGTTGAGGGCTCCA
Downstream region at tRNA end position 
attcagaagt
Secondary structure (Cloverleaf model)
>WENV170690502	Thr	GGT
                   c      TCCA attcagaagt
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T T
                    T     T G G T C     A
      T G A        A      | | | | |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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