The detailed information of tRNA gene sequence


Sequence ID>WENV170690526
Genome IDLFRM01346578
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 496
End posion on genome 572
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccaaccctta
tRNA gene sequence 
CGGGATGTGGCTCAGGCTGGTAGAGCGCTGCGTTCGGGACGCAGAGACCGGAGGTTCAAA
TCCTCTCATCCCGACCA
Downstream region at tRNA end position 
aaaaattaaa
Secondary structure (Cloverleaf model)
>WENV170690526	Pro	CGG
                   a      ACCA aaaaattaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
      G G A        G      + | | | |     A
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGACC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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