The detailed information of tRNA gene sequence


Sequence ID>WENV170690529
Genome IDLFRM01346591
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1386
End posion on genome 1460
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
aatatcttgt
tRNA gene sequence 
GCGGAAGTAGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCAAATC
CCGTCTTCCGCTCCA
Downstream region at tRNA end position 
gttttgaggc
Secondary structure (Cloverleaf model)
>WENV170690529	Gly	GCC
                   t      TCCA gttttgaggc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G C C C     A
        G A        A      + | | | |     A
      C     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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