The detailed information of tRNA gene sequence


Sequence ID>WENV170690537
Genome IDLFRM01346969
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 182
End posion on genome 110
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatagaaatt
tRNA gene sequence 
GGCGCCGTACCCAAGCGGTAAGGGAGAGGTCTGCAAAACCTTTATGCAGCAGTTCGATTC
TGCTCGGCGCCTCgt
Downstream region at tRNA end position 
ttacagccgt
Secondary structure (Cloverleaf model)
>WENV170690537	Cys	GCA
                   t      TCgt ttacagccgt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T C G T C     A
        G A        A      | | | | |     G
      C     A C C C       A G C A G     C
      G       | | |                 T T
      G     A G G G
        T A        A     TATGC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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