The detailed information of tRNA gene sequence


Sequence ID>WENV170690540
Genome IDLFRM01347135
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 288
End posion on genome 361
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
aaggccgaat
tRNA gene sequence 
AGCCCGGTAGTGTAGCGGTCAATCATGCAAGGCTCTGGACCTTGCGACAGCAGTTCGAAT
CTGCTCCGGGCTACtc
Downstream region at tRNA end position 
cttccttctt
Secondary structure (Cloverleaf model)
>WENV170690540	Gln	CTG
                   t      ACtc cttccttctt
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T C G T C     A
      C G A        A      | | | | |     G
    G       T G T G       A G C A G     C
    G         | | +                 T T
    T       T C A T
      C A A        G     CGAC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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