The detailed information of tRNA gene sequence


Sequence ID>WENV170690546
Genome IDLFRM01347428
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 735
End posion on genome 811
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttttcttgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCGAGTTCGAA
TCCCGCCGCCCCGACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170690546	Pro	TGG
                   t      ACCA nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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